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dc.coverage.spatialBogotá, Colombiaspa
dc.creatorPinzón, Andrés
dc.creatorMariño-Ramírez, Leonardo
dc.creatorHernández-Fernández, Javier
dc.date.accessioned2020-05-08T16:54:18Z
dc.date.available2020-05-08T16:54:18Z
dc.date.created2017
dc.identifier.issn2213-5960spa
dc.identifier.otherhttp://dx.doi.org/10.1016/j.gdata.2017.06.005spa
dc.identifier.urihttp://hdl.handle.net/20.500.12010/9236
dc.description.abstractLoggerhead sea turtle Caretta caretta is widely distributed in the oceans of tropical and subtropical latitude. This turtle is an endangered species due to anthropic and natural factors that have decreased their population levels. In this study, RNA sequencing and de-novo assembly of genes expressed in blood were performed. The raw FASTQ files have been deposited on NCBI's SRA database with accession number SRX2629512. A total of 5.4 Gb raw sequence data were obtained, corresponding to 48,257,019 raw reads. Trinity pipeline was used to perform a de-novo assembly, we were able to identify 64,930 transcripts for female loggerhead turtle transcriptome with an N50 of 1131 bp. The obtained transcriptome data will be useful for further studies of the physiology, biochemistry and evolution in this species.spa
dc.format.extent3 páginasspa
dc.format.mimetypeapplication/pdfspa
dc.publisherUniversidad de Bogotá Jorge Tadeo Lozanospa
dc.subjectCaretta caretta turtlespa
dc.subjectTrinityspa
dc.subjectRNAseqspa
dc.subjectIlluminaspa
dc.subjectN50spa
dc.titleDe novo transcriptome assembly of loggerhead sea turtle nesting of the Colombian Caribbeanspa
dc.type.localArtículospa
dc.subject.lembTortugas -- Investigacionesspa
dc.subject.lembARN -- Investigacionesspa
dc.rights.accessrightsinfo:eu-repo/semantics/openAccessspa
dc.type.hasversioninfo:eu-repo/semantics/acceptedVersionspa
dc.rights.localAbierto (Texto Completo)spa
dc.identifier.doihttp://dx.doi.org/10.1016/j.gdata.2017.06.005spa
dc.identifier.instnameinstname:Universidad de Bogotá Jorge Tadeo Lozanospa
dc.identifier.reponamereponame:Repositorio Institucional de la Universidad de Bogotá Jorge Tadeo Lozanospa
dc.type.driverinfo:eu-repo/semantics/articlespa


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